Comparative analysis of gene
expression in ill and well persons, followed by study of genes with differential expression in ill persons. Positional strategies: – whole-genome association (linkage disequilibrium) with densely spaced markers and/or/followed by mutational analysis; – positional cloning (detection of linkage, followed by association and mutational analysis of genes within the linkage region). Positional approaches based on linkage are currently in some disfavor, yet the recent success in type 2 diabetes (see Inhibitors,research,lifescience,medical below) , a common disease with similar inheritance to psychiatric disorders, belies the current disfavor. This review selectively focuses on a positional strategy, because such strategies exhaust all possibilities and thus have the capacity to uncover susceptibility genes that are surprises (ie, for which there is no prior hypothesis). Linkage followed Inhibitors,research,lifescience,medical by association (as opposed to genomewide association) is currently a feasible positional strategic choice. This is not to suggest that other strategies might not, in the Inhibitors,research,lifescience,medical end, prove more successful in finding susceptibility mutations. The scientific advances supporting the positional strategy include the following. Completion of the finished sequence phase of the Human Genome Project The Human Genome Project has made enormous contributions to the various maps of the human genome, including
Inhibitors,research,lifescience,medical genome-wide physical maps, very dense polymorphism maps, and integrated transcript maps. Sufficient single nucleotide polymorphisms (SNPs) for very dense mapping at almost all locations in the genome have also been developed. The genome project is now rapidly nearing its complete annotated sequence goal. This enables the genomic sequence of
any gene to be examined in blood or other specimens from any individual. An ability to do mutational analysis of any gene or group of genes is a vast advance over what has been so often done in psychiatry until now – testing one or a few polymorphisms of a gene, and Inhibitors,research,lifescience,medical generalizing from that result. Recent scientific developments supporting the feasibility of cloning genes for complex disorders, based on initial L-NAME HCl linkage findings The discovery of susceptibility genes for the major psychiatric disorders, BP and SZ, is thought to include some of the most intractable current problems in human genetics.1 The outlook for major advances based on genetic linkage and linkage disequilibrium has now greatly improved. The very recent availability of very dense SNP and other polymorphism maps has greatly improved the statistical power to detect linkage disequilibrium. Statistical methods developed in recent years for linkage and for combined linkage and linkage disequilibrium analyses, selleckchem including haplotype-based analyses,2-6 are capable of teasing apart subtle genetic components contributing to common diseases with complex inheritance.